diff --git a/Makefile b/Makefile
index 3705561f1a..fca7d47594 100644
--- a/Makefile
+++ b/Makefile
@@ -501,17 +501,17 @@ generate-backend: $(TAGS_PREREQ) generate-go
 .PHONY: generate-go
 generate-go: $(TAGS_PREREQ)
 	@echo "Running go generate..."
-	@CC= GOOS= GOARCH= CGO_ENABLED=0 $(GO) generate -tags '$(TAGS)' ./...
+	@CC= GOOS= GOARCH= CGO_ENABLED=0 $(GO) generate -tags '$(TAGS)' ./src/...
 
 .PHONY: security-check
 security-check:
-	GOEXPERIMENT= go run $(GOVULNCHECK_PACKAGE) -show color ./... || true
+	GOEXPERIMENT= go run $(GOVULNCHECK_PACKAGE) -show color ./src/... || true
 
 $(EXECUTABLE): $(GO_SOURCES) $(TAGS_PREREQ)
 ifneq ($(and $(STATIC),$(findstring pam,$(TAGS))),)
   $(error pam support set via TAGS does not support static builds)
 endif
-	CGO_ENABLED="$(CGO_ENABLED)" CGO_CFLAGS="$(CGO_CFLAGS)" $(GO) build $(GOFLAGS) $(EXTRA_GOFLAGS) -tags '$(TAGS)' -ldflags '-s -w $(EXTLDFLAGS) $(LDFLAGS)' -o $@
+	CGO_ENABLED="$(CGO_ENABLED)" CGO_CFLAGS="$(CGO_CFLAGS)" $(GO) build $(GOFLAGS) $(EXTRA_GOFLAGS) -tags '$(TAGS)' -ldflags '-s -w $(EXTLDFLAGS) $(LDFLAGS)' -o $@ ./src
 
 .PHONY: release
 release: frontend generate release-windows release-linux release-darwin release-freebsd release-copy release-compress vendor release-sources release-check
@@ -599,7 +599,7 @@ update: update-go update-js update-py ## update dependencies
 
 .PHONY: update-go
 update-go: ## update go dependencies
-	$(GO) get -u ./...
+	$(GO) get -u ./src/...
 	$(MAKE) tidy
 
 .PHONY: update-js